Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative xanthine/uracil permeases family protein yjcd | SAMEA3472108_01674 | Not Available | Negative | 1714567 - 1715916 | 45714.4 |
| arac family transcriptional regulator | SAMEA3472108_01676 | Not Available | Positive | 1717012 - 1717335 | 12911.6 |
| putative signal transduction protein | SAMEA3472108_01677 | Not Available | Negative | 1717338 - 1718924 | 60688.6 |
| inner membrane protein | SAMEA3472108_01678 | Not Available | Positive | 1719353 - 1719634 | 10304.0 |
| single-strand binding protein | SAMEA3472108_01679 | Not Available | Negative | 1719733 - 1720269 | 18976.1 |
| excision nuclease subunit a | SAMEA3472108_01680 | Not Available | Positive | 1720524 - 1723346 | 103890.0 |
| putative cytoplasmic protein yjbr | SAMEA3472108_01681 | Not Available | Negative | 1723381 - 1723737 | 13520.2 |
| thiamin phosphate synthase | SAMEA3472108_01682 | Not Available | Negative | 1723741 - 1724157 | 15656.8 |
| acid phosphatase/phosphotransferase | SAMEA3472108_01683 | Not Available | Negative | 1724268 - 1724981 | 26104.9 |
| uncharacterised protein | SAMEA3472108_01684 | Not Available | Positive | 1725399 - 1725902 | 19324.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





