Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallo-beta-lactamase superfamily protein | SAMEA3472108_01653 | Not Available | Positive | 1688204 - 1690189 | 73212.0 |
| formate dehydrogenase h | SAMEA3472108_01654 | Not Available | Positive | 1690398 - 1690673 | 10301.2 |
| multidrug resistance protein | SAMEA3472108_01655 | Not Available | Positive | 1690692 - 1691723 | 36950.3 |
| multidrug resistance protein | SAMEA3472108_01656 | Not Available | Positive | 1691723 - 1693774 | 76255.3 |
| multidrug resistance outer membrane protein | SAMEA3472108_01657 | Not Available | Positive | 1693771 - 1695237 | 53409.3 |
| formate dehydrogenase-h subunit alpha | SAMEA3472108_01659 | Not Available | Positive | 1695903 - 1697582 | 62465.9 |
| sel1 domain-containing protein | SAMEA3472108_01660 | Not Available | Positive | 1697676 - 1698365 | 25080.4 |
| glutamate/aspartate:proton symporter | SAMEA3472108_01661 | Not Available | Negative | 1698669 - 1699982 | 47134.0 |
| formate-dependent nitrite reductase complex subunit nrfg | SAMEA3472108_01662 | Not Available | Negative | 1700324 - 1700920 | 22773.5 |
| formate-dependent nitrite reductase complex subunit | SAMEA3472108_01663 | Not Available | Negative | 1700917 - 1701300 | 14488.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





