Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-phosphorus lyase complex accessory protein (metallo-beta-lactamase superfamily protein) | SAMEA3472108_01643 | Not Available | Positive | 1677539 - 1678297 | 27877.3 |
| membrane protein | SAMEA3472108_01644 | Not Available | Negative | 1678374 - 1678703 | 13423.2 |
| integral membrane sensor hybrid histidine kinase | SAMEA3472108_01645 | Not Available | Negative | 1678772 - 1681033 | 82112.4 |
| ribose abc transporter atp-binding protein | SAMEA3472108_01646 | Not Available | Positive | 1681147 - 1682667 | 55221.5 |
| ribose transport system permease rbsc | SAMEA3472108_01647 | Not Available | Positive | 1682664 - 1683638 | 33949.8 |
| abc transporter substrate-binding protein | SAMEA3472108_01648 | Not Available | Positive | 1683657 - 1684598 | 32790.5 |
| putative sugar related regulatory protein | SAMEA3472108_01649 | Not Available | Positive | 1684653 - 1685336 | 25829.2 |
| fructose-bisphosphate aldolase | SAMEA3472108_01650 | Not Available | Positive | 1685351 - 1686211 | 31050.1 |
| pfkb domain-containing protein | SAMEA3472108_01651 | Not Available | Positive | 1686208 - 1687209 | 36789.2 |
| transcriptional regulator | SAMEA3472108_01652 | Not Available | Negative | 1687206 - 1687913 | 26175.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





