Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin cpn60 | SAMEA3472108_01592 | Not Available | Negative | 1620074 - 1621720 | 57362.4 |
| 10 kda chaperonin (protein cpn10) (groes protein) | SAMEA3472108_01593 | Not Available | Negative | 1621764 - 1622057 | 10387.6 |
| inner membrane protein yjeh | SAMEA3472108_01594 | Not Available | Positive | 1622333 - 1623589 | 44817.2 |
| protein fxsa (suppressor of f exclusion of phage t7) | SAMEA3472108_01595 | Not Available | Negative | 1623605 - 1624081 | 17679.1 |
| aspartate ammonia-lyase | SAMEA3472108_01596 | Not Available | Positive | 1624418 - 1625854 | 52359.2 |
| anaerobic c4-dicarboxylate transporter | SAMEA3472108_01597 | Not Available | Positive | 1625972 - 1627273 | 45753.5 |
| divalent cation tolerance protein | SAMEA3472108_01598 | Not Available | Positive | 1627389 - 1627727 | 12331.7 |
| thiol:disulfide interchange protein | SAMEA3472108_01599 | Not Available | Positive | 1627703 - 1629400 | 61812.7 |
| putative transcriptional regulator | SAMEA3472108_01600 | Not Available | Positive | 1629437 - 1630012 | 21932.3 |
| Trna-phe | Not Available | Not Available | Positive | 1630119 - 1630194 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





