Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 1601035 - 1601110 | Not Available |
| oligoribonuclease | SAMEA3472108_01572 | Not Available | Negative | 1601321 - 1601866 | 20816.8 |
| ribosome-associated gtpase | SAMEA3472108_01573 | Not Available | Positive | 1601961 - 1603013 | 39225.6 |
| phosphatidylserine decarboxylase proenzyme | SAMEA3472108_01574 | Not Available | Positive | 1603110 - 1604078 | 35921.4 |
| mechanosensitive ion channel family protein | SAMEA3472108_01575 | Not Available | Positive | 1604100 - 1607423 | 123989.0 |
| transporter | SAMEA3472108_01576 | Not Available | Negative | 1607574 - 1609031 | 53015.9 |
| lysyl-trna synthetase | SAMEA3472108_01577 | Not Available | Negative | 1609295 - 1610272 | 36978.1 |
| fumarate reductase flavoprotein subunit | SAMEA3472108_01578 | Not Available | Positive | 1610597 - 1612405 | 65975.5 |
| fumarate reductase iron-sulfur subunit | SAMEA3472108_01579 | Not Available | Positive | 1612398 - 1613132 | 27124.5 |
| fumarate reductase subunit c | SAMEA3472108_01580 | Not Available | Positive | 1613143 - 1613538 | 15015.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





