Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved protein, duf2491 family | SAMEA3472108_01551 | Not Available | Negative | 1581840 - 1582166 | 11897.0 |
| phage shock protein a | SAMEA3472108_01552 | Not Available | Negative | 1582217 - 1582915 | 25335.0 |
| cytoplasmic protein | SAMEA3472108_01553 | Not Available | Negative | 1582934 - 1583335 | 14935.8 |
| 23s rrna (guanosine-2'-o-)-methyltransferase rlmb | SAMEA3472108_01554 | Not Available | Negative | 1583462 - 1584193 | 26558.3 |
| exoribonuclease r | SAMEA3472108_01555 | Not Available | Negative | 1584374 - 1586815 | 92182.5 |
| transcriptional repressor nsrr | SAMEA3472108_01556 | Not Available | Negative | 1586854 - 1587279 | 15594.0 |
| adenylosuccinate synthetase | SAMEA3472108_01557 | Not Available | Negative | 1587484 - 1588782 | 47347.7 |
| membrane protein yjet | SAMEA3472108_01558 | Not Available | Negative | 1588886 - 1589083 | 7166.26 |
| hflc protein | SAMEA3472108_01559 | Not Available | Negative | 1589165 - 1590169 | 37652.0 |
| hflk protein | SAMEA3472108_01560 | Not Available | Negative | 1590172 - 1591431 | 45547.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





