Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ascorbate 6-phosphate lactonase | SAMEA3472108_01541 | Not Available | Positive | 1573843 - 1574907 | 40062.7 |
| deor-family transcriptional regulator | SAMEA3472108_01542 | Not Available | Positive | 1575015 - 1575770 | 27603.6 |
| putative esterase | SAMEA3472108_01543 | Not Available | Negative | 1575767 - 1576516 | 27590.9 |
| putative lipoprotein | SAMEA3472108_01544 | Not Available | Positive | 1576698 - 1577027 | 12066.7 |
| protein | SAMEA3472108_01545 | Not Available | Positive | 1577176 - 1577451 | 9949.64 |
| isovaleryl coa dehydrogenase | SAMEA3472108_01546 | Not Available | Negative | 1577568 - 1579193 | 60608.5 |
| glutathionylspermidine synthase yjfc | SAMEA3472108_01547 | Not Available | Negative | 1579277 - 1580440 | 45066.0 |
| putative membrane protein yjfm | SAMEA3472108_01548 | Not Available | Negative | 1580443 - 1581081 | 23541.1 |
| membrane protein yjfl | SAMEA3472108_01549 | Not Available | Negative | 1581091 - 1581489 | 14252.7 |
| conserved protein, duf2491 family | SAMEA3472108_01550 | Not Available | Negative | 1581507 - 1581803 | 11593.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





