Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s18 | SAMEA3472108_01531 | Not Available | Negative | 1567402 - 1567629 | 8986.94 |
| primosomal replication protein n | SAMEA3472108_01532 | Not Available | Negative | 1567634 - 1567948 | 11442.9 |
| 30s ribosomal protein s6 | SAMEA3472108_01533 | Not Available | Negative | 1567955 - 1568350 | 15187.9 |
| protein | SAMEA3472108_01534 | Not Available | Positive | 1568677 - 1568952 | 10149.9 |
| l-ribulose-5-phosphate 4-epimerase ulaf | SAMEA3472108_01535 | Not Available | Negative | 1569082 - 1569768 | 25309.2 |
| l-xylulose 5-phosphate 3-epimerase | SAMEA3472108_01536 | Not Available | Negative | 1569768 - 1570622 | 32050.4 |
| 3-keto-l-gulonate-6-phosphate decarboxylase | SAMEA3472108_01537 | Not Available | Negative | 1570632 - 1571282 | 23650.4 |
| ascorbate-specific pts system eiia component | SAMEA3472108_01538 | Not Available | Negative | 1571296 - 1571760 | 17194.5 |
| pts system l-ascorbate-specific transporter subunit iib | SAMEA3472108_01539 | Not Available | Negative | 1571770 - 1572075 | 10923.3 |
| pts system ascorbate-specific transporter subunit iic | SAMEA3472108_01540 | Not Available | Negative | 1572091 - 1573488 | 50717.5 |
Pathways
888 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





