Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator ytfh | SAMEA3472108_01521 | Not Available | Negative | 1558975 - 1559355 | 14094.0 |
| nad(p)h:quinone oxidoreductase | SAMEA3472108_01522 | Not Available | Positive | 1559444 - 1560304 | 29788.2 |
| membrane protein ytff | SAMEA3472108_01523 | Not Available | Positive | 1560412 - 1561377 | 35266.7 |
| regulator of cell morphogenesis and no signaling | SAMEA3472108_01524 | Not Available | Positive | 1561485 - 1562147 | 24884.1 |
| d-serine/d-alanine/glycine transporter | SAMEA3472108_01525 | Not Available | Negative | 1562192 - 1563604 | 51662.6 |
| fkbp-type 22 kda peptidyl-prolyl cis-trans isomerase | SAMEA3472108_01526 | Not Available | Negative | 1563913 - 1564533 | 22217.5 |
| cell envelope opacity-associated protein | SAMEA3472108_01527 | Not Available | Positive | 1564751 - 1565389 | 23506.9 |
| putative transcriptional regulator | SAMEA3472108_01528 | Not Available | Negative | 1565373 - 1565699 | 12234.8 |
| protein of uncharacterised function (duf2686) | SAMEA3472108_01529 | Not Available | Positive | 1566046 - 1566840 | 29741.1 |
| 50s ribosomal protein l9 | SAMEA3472108_01530 | Not Available | Negative | 1566911 - 1567360 | 15770.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





