Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aig2 family protein | SAMEA3472108_01510 | Not Available | Negative | 1545261 - 1545602 | 12867.2 |
| translocation and assembly module for autotransporter export, inner membrane subunit | SAMEA3472108_01511 | Not Available | Negative | 1545605 - 1549384 | 136818.0 |
| putative outer membrane protein assembly factor | SAMEA3472108_01512 | Not Available | Negative | 1549381 - 1551114 | 64799.7 |
| methionine sulfoxide reductase a | SAMEA3472108_01513 | Not Available | Positive | 1551320 - 1551958 | 23335.3 |
| putative transporter | SAMEA3472108_01515 | Not Available | Positive | 1552281 - 1553624 | 49783.6 |
| conserved protein, duf1107 family | SAMEA3472108_01516 | Not Available | Negative | 1553686 - 1553892 | 8072.24 |
| protein ytfj | SAMEA3472108_01517 | Not Available | Positive | 1554217 - 1554771 | 20495.7 |
| uncharacterised protein | SAMEA3472108_01518 | Not Available | Negative | 1554834 - 1555772 | 35884.7 |
| cysq protein | SAMEA3472108_01519 | Not Available | Negative | 1555984 - 1556724 | 27172.3 |
| bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein | SAMEA3472108_01520 | Not Available | Positive | 1556914 - 1558857 | 70850.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





