Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alpha helix protein | SAMEA3472108_01500 | Not Available | Positive | 1535631 - 1536182 | 21360.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | SAMEA3472108_01501 | Not Available | Negative | 1536338 - 1537711 | 49882.0 |
| fructose-1,6-bisphosphatase | SAMEA3472108_01502 | Not Available | Positive | 1537887 - 1538885 | 36836.0 |
| abc transporter permease | SAMEA3472108_01503 | Not Available | Negative | 1538918 - 1539913 | 35008.0 |
| abc transporter permease | SAMEA3472108_01504 | Not Available | Negative | 1539900 - 1540922 | 35530.1 |
| sugar transport system atp-binding protein | SAMEA3472108_01505 | Not Available | Negative | 1540936 - 1542438 | 55290.4 |
| abc transporter substrate-binding protein | SAMEA3472108_01506 | Not Available | Negative | 1542578 - 1543534 | 34332.5 |
| inorganic pyrophosphatase | SAMEA3472108_01507 | Not Available | Positive | 1543844 - 1544374 | 19718.6 |
| toxin chpb | SAMEA3472108_01508 | Not Available | Negative | 1544454 - 1544768 | 11123.6 |
| antitoxin chps | SAMEA3472108_01509 | Not Available | Negative | 1544798 - 1545049 | 9272.12 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





