Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | SAMEA3472108_01439 | Not Available | Negative | 1462058 - 1462708 | 24228.2 |
| uncharacterised protein | SAMEA3472108_01440 | Not Available | Positive | 1463087 - 1463272 | 6997.6 |
| uncharacterised protein | SAMEA3472108_01441 | Not Available | Negative | 1464186 - 1466417 | 85385.6 |
| uncharacterised protein | SAMEA3472108_01442 | Not Available | Negative | 1466414 - 1471123 | 180743.0 |
| transcriptional regulator, y4mf family | SAMEA3472108_01443 | Not Available | Negative | 1472822 - 1473619 | 30418.8 |
| rele/pare family plasmid stabilization system protein | SAMEA3472108_01444 | Not Available | Negative | 1473734 - 1474009 | 11044.0 |
| copg-family putative dna binding protein | SAMEA3472108_01445 | Not Available | Negative | 1474013 - 1474285 | 10005.2 |
| restriction methylase | SAMEA3472108_01446 | Not Available | Negative | 1474338 - 1475171 | 32035.3 |
| phage-associated protein | SAMEA3472108_01447 | Not Available | Negative | 1475286 - 1475627 | 13077.0 |
| antitoxin of the yeev-yeeu toxin-antitoxin system, cp4-44 prophage | SAMEA3472108_01448 | Not Available | Negative | 1475658 - 1475972 | 11688.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





