Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein yjia | SAMEA3472108_01363 | Not Available | Negative | 1396890 - 1397846 | 35678.9 |
| yjix protein | SAMEA3472108_01364 | Not Available | Negative | 1397857 - 1398060 | 7729.24 |
| putative carbon starvation protein | SAMEA3472108_01365 | Not Available | Negative | 1398110 - 1400260 | 77314.5 |
| 4-hydroxyphenylacetate 3-monooxygenase, reductase component | SAMEA3472108_01366 | Not Available | Negative | 1400653 - 1401165 | 18522.7 |
| 4-hydroxyphenylacetate 3-monooxygenase oxygenase component | SAMEA3472108_01367 | Not Available | Negative | 1401183 - 1402745 | 58868.0 |
| ribonuclease z | SAMEA3472108_01368 | Not Available | Negative | 1402972 - 1403910 | 33983.0 |
| 4-hydroxyphenylacetate catabolism regulatory protein hpaa | SAMEA3472108_01369 | Not Available | Negative | 1403937 - 1404827 | 34612.5 |
| putative 4-hydroxyphenylacetate permease hpax | SAMEA3472108_01370 | Not Available | Negative | 1404837 - 1406192 | 49994.2 |
| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | SAMEA3472108_01371 | Not Available | Negative | 1406214 - 1407017 | 28673.4 |
| 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | SAMEA3472108_01372 | Not Available | Negative | 1407028 - 1407831 | 29716.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





