Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug resistance protein | SAMEA3472108_01352 | Not Available | Negative | 1382301 - 1383533 | 44568.0 |
| transposase | SAMEA3472108_01353 | Not Available | Positive | 1384000 - 1384944 | 36765.3 |
| fused dna-binding transcriptional regulator | SAMEA3472108_01354 | Not Available | Negative | 1385186 - 1386598 | 53019.7 |
| protein yjis | SAMEA3472108_01355 | Not Available | Positive | 1386775 - 1386939 | 6900.42 |
| uncharacterized conserved protein | SAMEA3472108_01356 | Not Available | Positive | 1387036 - 1389129 | 81117.9 |
| type i restriction-modification system subunit s | SAMEA3472108_01358 | Not Available | Negative | 1389738 - 1391495 | 66392.8 |
| restriction modification enzyme m subunit | SAMEA3472108_01359 | Not Available | Negative | 1391495 - 1392964 | 55232.6 |
| type i restriction enzyme ecoai r protein | SAMEA3472108_01360 | Not Available | Negative | 1393031 - 1395463 | 92059.2 |
| uncharacterised protein | SAMEA3472108_01361 | Not Available | Positive | 1395604 - 1396572 | 37496.4 |
| uncharacterized protein conserved in bacteria | SAMEA3472108_01362 | Not Available | Positive | 1396612 - 1396803 | 6979.12 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





