Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3472108_01311 | Not Available | Negative | 1333745 - 1334044 | 10836.0 |
| putative translation initiation inhibitor | SAMEA3472108_01312 | Not Available | Negative | 1334466 - 1334813 | 12625.1 |
| putative atp-binding protein | SAMEA3472108_01313 | Not Available | Positive | 1334942 - 1336852 | 70365.9 |
| protease yeaz | SAMEA3472108_01314 | Not Available | Positive | 1336910 - 1337605 | 25097.2 |
| putative lipoprotein | SAMEA3472108_01315 | Not Available | Positive | 1337645 - 1338226 | 20922.4 |
| ribonuclease d | SAMEA3472108_01317 | Not Available | Positive | 1340198 - 1341313 | 42214.0 |
| putative oxidoreductase | SAMEA3472108_01318 | Not Available | Negative | 1341367 - 1342332 | 35729.3 |
| putative oxidoreductase | SAMEA3472108_01319 | Not Available | Negative | 1342388 - 1343512 | 42548.9 |
| bcct-family transporter | SAMEA3472108_01320 | Not Available | Negative | 1343544 - 1345154 | 58677.4 |
| tartrate dehydrogenase/decarboxylase (d-malate dehydrogenase | SAMEA3472108_01321 | Not Available | Negative | 1345405 - 1346490 | 40290.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





