Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity zinc transporter atpase | SAMEA3472108_01258 | Not Available | Negative | 1284759 - 1285514 | 27869.3 |
| high-affinity zinc transporter periplasmic protein | SAMEA3472108_01259 | Not Available | Positive | 1285539 - 1286525 | 35991.2 |
| putative peptidoglycan-binding peptidase | SAMEA3472108_01260 | Not Available | Positive | 1286541 - 1287863 | 49060.6 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | SAMEA3472108_01261 | Not Available | Positive | 1287983 - 1288954 | 37412.5 |
| pyruvate kinase | SAMEA3472108_01262 | Not Available | Negative | 1289085 - 1290527 | 51360.3 |
| putative hex-regulon repressor (rpir-family transcriptional regulator) | SAMEA3472108_01263 | Not Available | Negative | 1290655 - 1291524 | 31959.3 |
| uncharacterised protein | SAMEA3472108_01264 | Not Available | Positive | 1291547 - 1291696 | 5714.39 |
| glucose-6-phosphate dehydrogenase | SAMEA3472108_01265 | Not Available | Positive | 1291862 - 1293337 | 55734.5 |
| phosphogluconate dehydratase | SAMEA3472108_01266 | Not Available | Positive | 1293572 - 1295383 | 64642.9 |
| khg/kdpg aldolase | SAMEA3472108_01267 | Not Available | Positive | 1295420 - 1296061 | 22285.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





