Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein flhe | SAMEA3472108_01238 | Not Available | Positive | 1265197 - 1265592 | 14175.5 |
| protein | SAMEA3472108_01239 | Not Available | Negative | 1265714 - 1266202 | 18872.1 |
| arginyl-trna synthetase | SAMEA3472108_01240 | Not Available | Negative | 1266379 - 1268112 | 64685.7 |
| protein yecm | SAMEA3472108_01241 | Not Available | Positive | 1268328 - 1268894 | 21194.1 |
| copper homeostasis protein | SAMEA3472108_01242 | Not Available | Positive | 1268908 - 1269654 | 26642.2 |
| cytochrome c-type protein | SAMEA3472108_01243 | Not Available | Positive | 1270042 - 1271142 | 40221.5 |
| trimethylamine-n-oxide reductase 2 | SAMEA3472108_01244 | Not Available | Positive | 1271167 - 1273596 | 88906.8 |
| putative methyltransferase | SAMEA3472108_01245 | Not Available | Negative | 1273761 - 1274732 | 37008.6 |
| protein yeco | SAMEA3472108_01246 | Not Available | Negative | 1274729 - 1275472 | 27792.3 |
| inner membrane protein | SAMEA3472108_01247 | Not Available | Negative | 1275513 - 1275908 | 15227.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





