Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472108_01187 | Not Available | Negative | 1216883 - 1218088 | 44431.5 |
| putative lipoprotein | SAMEA3472108_01188 | Not Available | Positive | 1218275 - 1218688 | 15002.1 |
| alpha-amylase | SAMEA3472108_01189 | Not Available | Negative | 1218722 - 1220209 | 56617.2 |
| flagellar protein flit | SAMEA3472108_01190 | Not Available | Negative | 1220287 - 1220652 | 13843.7 |
| flagellar protein flis | SAMEA3472108_01191 | Not Available | Negative | 1220652 - 1221062 | 15020.1 |
| flagellar capping protein | SAMEA3472108_01192 | Not Available | Negative | 1221087 - 1222493 | 48486.1 |
| flagellin | SAMEA3472108_01193 | Not Available | Positive | 1222759 - 1224489 | 58521.1 |
| rna polymerase sigma factor for flagellar operon | SAMEA3472108_01194 | Not Available | Positive | 1224809 - 1225528 | 27522.8 |
| fliz protein | SAMEA3472108_01195 | Not Available | Positive | 1225574 - 1226125 | 21543.9 |
| cystine transporter subunit | SAMEA3472108_01196 | Not Available | Positive | 1226156 - 1227013 | 31098.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





