Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tyrosine-type recombinase/integrase | SAMEA3472108_01433 | Not Available | Negative | 1456032 - 1456628 | 23117.6 |
| Attr | Not Available | Not Available | Positive | 1456800 - 1456811 | Not Available |
| Phage xerd-like integrase | SAMEA3472108_01434 | Not Available | Negative | 1457106 - 1457708 | 22994.8 |
| Attr | Not Available | Not Available | Positive | 1471371 - 1471382 | Not Available |
| Attl | Not Available | Not Available | Positive | 2105649 - 2105695 | Not Available |
| Integrase | SAMEA3472108_02012 | Not Available | Negative | 2105709 - 2106872 | 45020.5 |
| Hypothetical protein | SAMEA3472108_02013 | Not Available | Negative | 2107099 - 2107404 | 12105.4 |
| Hypothetical protein | SAMEA3472108_02014 | Not Available | Negative | 2107404 - 2107766 | 13686.3 |
| Hypothetical protein | SAMEA3472108_02015 | Not Available | Negative | 2107757 - 2108293 | 20272.5 |
| Hypothetical protein | SAMEA3472108_02016 | Not Available | Negative | 2108421 - 2109245 | 30444.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





