Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alpha helix protein | SAMEA3472108_01125 | Not Available | Positive | 1156681 - 1157010 | 12778.5 |
| bifunctional adenosylcobalamin biosynthesis protein | SAMEA3472108_01126 | Not Available | Positive | 1157882 - 1158424 | 19939.9 |
| cobalamin synthase | SAMEA3472108_01127 | Not Available | Positive | 1158421 - 1159164 | 26415.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SAMEA3472108_01128 | Not Available | Positive | 1159176 - 1160255 | 36993.4 |
| erfk/ybis/ycfs/ynhg family protein | SAMEA3472108_01129 | Not Available | Positive | 1160317 - 1161252 | 34514.3 |
| Trna-asn | Not Available | Not Available | Positive | 1161308 - 1161383 | Not Available |
| nitrogen assimilation regulatory protein nac | SAMEA3472108_01131 | Not Available | Positive | 1161709 - 1162626 | 32823.0 |
| lysr family transcriptional regulator | SAMEA3472108_01132 | Not Available | Positive | 1162728 - 1163678 | 35883.1 |
| Trna-asn | Not Available | Not Available | Positive | 1163716 - 1163791 | Not Available |
| multidrug efflux system | SAMEA3472108_01134 | Not Available | Positive | 1163985 - 1165439 | 52778.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





