Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 6-dehydrogenase | SAMEA3472108_01103 | Not Available | Positive | 1135519 - 1136685 | 43425.8 |
| vi polysaccharide biosynthesis protein vipb/tvic | SAMEA3472108_01104 | Not Available | Negative | 1136751 - 1137755 | 37513.7 |
| o-antigen chain length determinant wzz | SAMEA3472108_01105 | Not Available | Positive | 1138181 - 1139161 | 36281.7 |
| histidine biosynthesis bifunctional protein | SAMEA3472108_01106 | Not Available | Negative | 1139258 - 1139869 | 22815.1 |
| imidazole glycerol phosphate synthase subunit | SAMEA3472108_01107 | Not Available | Negative | 1139863 - 1140639 | 28457.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMEA3472108_01108 | Not Available | Negative | 1140621 - 1141358 | 26027.2 |
| imidazole glycerol phosphate synthase subunit | SAMEA3472108_01109 | Not Available | Negative | 1141358 - 1141948 | 21654.1 |
| imidazole glycerol-phosphate dehydratase/histidinol phosphatase | SAMEA3472108_01110 | Not Available | Negative | 1141948 - 1143015 | 40265.3 |
| histidinol-phosphate aminotransferase | SAMEA3472108_01111 | Not Available | Negative | 1143015 - 1144085 | 39350.3 |
| histidinol dehydrogenase | SAMEA3472108_01112 | Not Available | Negative | 1144082 - 1145386 | 46103.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





