Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor protein | SAMEA3472108_01061 | Not Available | Negative | 1086329 - 1089646 | 123967.0 |
| uridine kinase | SAMEA3472108_01062 | Not Available | Positive | 1089964 - 1090605 | 24354.6 |
| 2'-deoxycytidine 5'-triphosphate deaminase | SAMEA3472108_01063 | Not Available | Positive | 1090697 - 1091278 | 21222.4 |
| putative outer membrane assembly protein | SAMEA3472108_01064 | Not Available | Positive | 1091300 - 1093153 | 68936.9 |
| transporter | SAMEA3472108_01065 | Not Available | Negative | 1093605 - 1095188 | 59453.9 |
| putative polysaccharide export protein | SAMEA3472108_01067 | Not Available | Positive | 1095847 - 1096986 | 41912.4 |
| protein-tyrosine-phosphatase | SAMEA3472108_01068 | Not Available | Positive | 1096992 - 1097435 | 16710.2 |
| tyrosine kinase | SAMEA3472108_01069 | Not Available | Positive | 1097438 - 1099600 | 79372.7 |
| putative glycosyl transferase | SAMEA3472108_01070 | Not Available | Positive | 1099693 - 1100532 | 33023.5 |
| putative acetyltransferase | SAMEA3472108_01071 | Not Available | Positive | 1100535 - 1101023 | 17616.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





