Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2135 family protein, function uncharacterised | SAMEA3472108_00858 | Not Available | Positive | 873294 - 874070 | 28258.1 |
| uncharacterised protein | SAMEA3472108_00859 | Not Available | Negative | 874080 - 874205 | 4598.52 |
| two-component system sensor kinase | SAMEA3472108_00860 | Not Available | Positive | 874345 - 877194 | 106499.0 |
| transcriptional regulator rcsb | SAMEA3472108_00861 | Not Available | Negative | 877394 - 878044 | 23672.0 |
| two-component system sensor kinase | SAMEA3472108_00862 | Not Available | Negative | 878061 - 880733 | 100368.0 |
| outer membrane porin protein c | SAMEA3472108_00864 | Not Available | Positive | 881472 - 882593 | 41404.5 |
| thiamine biosynthesis lipoprotein | SAMEA3472108_00865 | Not Available | Positive | 882705 - 883760 | 38579.0 |
| regulatory protein of adaptative response | SAMEA3472108_00866 | Not Available | Positive | 883834 - 884898 | 39299.1 |
| alpha-ketoglutarate-dependent dioxygenase (alkylated dna repair protein) | SAMEA3472108_00867 | Not Available | Positive | 884898 - 885548 | 24022.7 |
| abc transporter atpase/permease | SAMEA3472108_00868 | Not Available | Positive | 885624 - 887267 | 61542.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





