Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine/lysine/arginine/ornithine transporter subunit | SAMEA3472108_00778 | Not Available | Positive | 777750 - 778523 | 28610.8 |
| transposase | SAMEA3472108_00779 | Not Available | Positive | 778720 - 779610 | 34178.4 |
| nad(p)-binding rossmann-fold domain | SAMEA3472108_00780 | Not Available | Negative | 779658 - 780551 | 32736.7 |
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | SAMEA3472108_00781 | Not Available | Negative | 780572 - 780934 | 14082.8 |
| putative glutathione s-transferase | SAMEA3472108_00782 | Not Available | Negative | 780991 - 781638 | 24445.2 |
| putative glutathione s-transferase | SAMEA3472108_00783 | Not Available | Positive | 781774 - 782418 | 24283.0 |
| putative phosphodiesterase | SAMEA3472108_00784 | Not Available | Positive | 782474 - 783025 | 19992.1 |
| nudix hydrolase | SAMEA3472108_00785 | Not Available | Positive | 783083 - 783625 | 20376.9 |
| putative c4-dicarboxylate anaerobic transporter | SAMEA3472108_00786 | Not Available | Negative | 783658 - 785136 | 53184.1 |
| phosphate acetyltransferase | SAMEA3472108_00787 | Not Available | Negative | 785368 - 787512 | 77162.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





