Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | SAMEA3472108_00648 | Not Available | Negative | 650847 - 651509 | 25077.4 |
| gamma-aminobutyrate transporter | SAMEA3472108_00649 | Not Available | Negative | 651530 - 652930 | 51069.1 |
| 4-aminobutyrate aminotransferase | SAMEA3472108_00650 | Not Available | Negative | 653438 - 654718 | 45636.2 |
| succinate-semialdehyde dehydrogenase | SAMEA3472108_00651 | Not Available | Negative | 654762 - 656180 | 50628.5 |
| hydroxyglutarate oxidase | SAMEA3472108_00652 | Not Available | Negative | 656203 - 657471 | 46041.6 |
| protein csid | SAMEA3472108_00653 | Not Available | Negative | 657491 - 658468 | 37421.6 |
| alpha-amylase | SAMEA3472108_00654 | Not Available | Negative | 658805 - 661057 | 85071.0 |
| Trna-met | Not Available | Not Available | Positive | 661617 - 661692 | Not Available |
| uncharacterised protein | SAMEA3472108_00656 | Not Available | Positive | 662444 - 663817 | 51567.5 |
| abc transporter atp-binding protein | SAMEA3472108_00657 | Not Available | Positive | 664729 - 669327 | 158235.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





