Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit 3 | SAMEA3472108_00587 | Not Available | Positive | 596274 - 598100 | 64127.2 |
| formate hydrogenlyase subunit 4 | SAMEA3472108_00588 | Not Available | Positive | 598103 - 599026 | 33059.4 |
| formate hydrogenlyase subunit e | SAMEA3472108_00589 | Not Available | Positive | 599044 - 600753 | 64970.1 |
| formate hydrogenlyase subunit 6 | SAMEA3472108_00590 | Not Available | Positive | 600763 - 601305 | 20329.4 |
| formate hydrogenlyase subunit 7 | SAMEA3472108_00591 | Not Available | Positive | 601305 - 602072 | 28005.7 |
| formate hydrogenlyase maturation protein | SAMEA3472108_00592 | Not Available | Positive | 602069 - 602479 | 15465.5 |
| hydrogenase 3 maturation protease | SAMEA3472108_00593 | Not Available | Positive | 602472 - 602942 | 17057.6 |
| periplasmic or exported protein | SAMEA3472108_00594 | Not Available | Positive | 602985 - 603740 | 28402.2 |
| translation-dependent mrna interferase, toxin of the higb-higa toxin-antitoxin system | SAMEA3472108_00595 | Not Available | Positive | 603902 - 604213 | 12467.8 |
| hth-type transcriptional regulator ygjm | SAMEA3472108_00596 | Not Available | Positive | 604210 - 604629 | 15417.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





