Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase | SAMEA3472108_00567 | Not Available | Positive | 578691 - 579317 | 23259.2 |
| lipoprotein nlpd | SAMEA3472108_00568 | Not Available | Positive | 579457 - 580596 | 40151.3 |
| rna polymerase sigma factor rpos | SAMEA3472108_00569 | Not Available | Positive | 580659 - 581651 | 37975.1 |
| regulator | SAMEA3472108_00570 | Not Available | Negative | 581771 - 582178 | 15479.8 |
| 4-hydroxybenzoate decarboxylase subunit b | SAMEA3472108_00571 | Not Available | Positive | 582325 - 582918 | 21445.2 |
| 4-hydroxybenzoate decarboxylase subunit c | SAMEA3472108_00572 | Not Available | Positive | 582918 - 584345 | 52417.8 |
| 4-hydroxybenzoate decarboxylase subunit d | SAMEA3472108_00573 | Not Available | Positive | 584356 - 584592 | 9180.06 |
| serine/threonine-specific protein phosphatase 2 | SAMEA3472108_00574 | Not Available | Negative | 584633 - 585289 | 25085.7 |
| dna mismatch repair protein muts | SAMEA3472108_00575 | Not Available | Negative | 585395 - 587956 | 95224.5 |
| uncharacterised protein | SAMEA3472108_00576 | Not Available | Negative | 587953 - 588186 | 8636.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





