Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage tail sheath protein fi | SAMEA3472056_00368 | Not Available | Positive | 374746 - 375936 | 43107.0 |
| Tail tube protein | SAMEA3472056_00369 | Not Available | Positive | 375949 - 376467 | 19083.9 |
| Tail protein | SAMEA3472056_00370 | Not Available | Positive | 376524 - 376799 | 9678.95 |
| Gpt | SAMEA3472056_00371 | Not Available | Positive | 376944 - 379391 | 86502.7 |
| Tail protein | SAMEA3472056_00372 | Not Available | Positive | 379406 - 379885 | 17457.3 |
| Tail protein | SAMEA3472056_00373 | Not Available | Positive | 379885 - 381048 | 42747.9 |
| Putative positive regulator of late gene transcription | SAMEA3472056_00374 | Not Available | Positive | 381130 - 381348 | 8432.18 |
| Attr | Not Available | Not Available | Positive | 381461 - 381473 | Not Available |
| Pyruvate formate-lyase | SAMEA3472056_00375 | Not Available | Negative | 381667 - 383949 | 85355.0 |
| Hypothetical protein | SAMEA3472056_00639 | Not Available | Positive | 689489 - 690538 | 39032.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





