Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide export protein | SAMEA3472056_00456 | Not Available | Negative | 475043 - 476182 | 41743.2 |
| putative lipoprotein | SAMEA3472056_00457 | Not Available | Negative | 476228 - 478324 | 78675.2 |
| group 4 capsule (g4c) polysaccharide, ymcb | SAMEA3472056_00458 | Not Available | Negative | 478324 - 479070 | 27297.6 |
| outer membrane lipoprotein | SAMEA3472056_00459 | Not Available | Negative | 479067 - 479711 | 24249.9 |
| inner membrane protein | SAMEA3472056_00460 | Not Available | Negative | 479818 - 480123 | 9447.98 |
| protein gnsa | SAMEA3472056_00462 | Not Available | Positive | 481669 - 481842 | 6575.99 |
| putative electron transport protein | SAMEA3472056_00463 | Not Available | Negative | 481891 - 482964 | 40091.4 |
| hybrid sensory histidine kinase tors | SAMEA3472056_00464 | Not Available | Negative | 483036 - 485735 | 99029.9 |
| solute-binding periplasmic protein | SAMEA3472056_00465 | Not Available | Positive | 485863 - 486891 | 37932.9 |
| two-component response regulator | SAMEA3472056_00466 | Not Available | Negative | 486864 - 487556 | 26163.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





