Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease la | SAMEA3472056_00428 | Not Available | Negative | 446899 - 448659 | 65858.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 448793 - 448907 | Not Available |
| putative dehydrogenase | SAMEA3472056_00429 | Not Available | Positive | 448845 - 449297 | 17694.4 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 449004 - 451914 | Not Available |
| outer membrane protein a | SAMEA3472056_00430 | Not Available | Negative | 449373 - 450428 | 37713.2 |
| sos cell division inhibitor | SAMEA3472056_00431 | Not Available | Negative | 450785 - 451294 | 18812.5 |
| putative dna transformation protein with tfox domain | SAMEA3472056_00432 | Not Available | Positive | 451513 - 452142 | 24148.3 |
| membrane protein yccs | SAMEA3472056_00433 | Not Available | Negative | 452105 - 454267 | 82022.7 |
| putative inner membrane protein yccf | SAMEA3472056_00434 | Not Available | Negative | 454277 - 454723 | 16276.3 |
| dna helicase iv | SAMEA3472056_00435 | Not Available | Positive | 454846 - 456900 | 77867.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





