Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exported protein ycbk | SAMEA3472056_00398 | Not Available | Positive | 413469 - 414017 | 20355.6 |
| metal-binding hydrolase | SAMEA3472056_00399 | Not Available | Positive | 414044 - 414691 | 23773.4 |
| aspartate aminotransferase | SAMEA3472056_00400 | Not Available | Negative | 414741 - 415931 | 43603.8 |
| outer membrane protein f | SAMEA3472056_00401 | Not Available | Negative | 416116 - 417186 | 38657.7 |
| asparaginyl-trna synthetase | SAMEA3472056_00402 | Not Available | Negative | 417789 - 419189 | 52589.2 |
| nicotinate phosphoribosyltransferase | SAMEA3472056_00403 | Not Available | Negative | 419359 - 420561 | 45899.8 |
| aminopeptidase n | SAMEA3472056_00404 | Not Available | Positive | 420827 - 423439 | 98942.2 |
| uncharacterised protein | SAMEA3472056_00405 | Not Available | Negative | 423296 - 423670 | 14317.6 |
| putative aliphatic sulfonates abc transporter, atp-binding protein | SAMEA3472056_00406 | Not Available | Negative | 423633 - 424400 | 27770.9 |
| putative aliphatic sulfonates abc transporter permease | SAMEA3472056_00407 | Not Available | Negative | 424397 - 425191 | 29058.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





