Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytoplasmic protein | SAMEA3472056_00388 | Not Available | Positive | 399783 - 401015 | 47676.6 |
| peroxide and acid resistance protein, upf0434 family | SAMEA3472056_00389 | Not Available | Positive | 401067 - 401249 | 6855.35 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | SAMEA3472056_00390 | Not Available | Positive | 401246 - 401992 | 27597.1 |
| uncharacterised protein | SAMEA3472056_00391 | Not Available | Positive | 402146 - 403039 | 34489.6 |
| inner membrane protein | SAMEA3472056_00392 | Not Available | Negative | 403016 - 403795 | 28694.0 |
| metallothionein smta | SAMEA3472056_00393 | Not Available | Positive | 403931 - 404716 | 29797.0 |
| chromosome partition protein | SAMEA3472056_00394 | Not Available | Positive | 404713 - 406035 | 50581.7 |
| condesin subunit e | SAMEA3472056_00395 | Not Available | Positive | 406016 - 406720 | 26976.1 |
| chromosome partition protein | SAMEA3472056_00396 | Not Available | Positive | 406720 - 411180 | 170246.0 |
| putative peptidoglycan binding domain-containing protein | SAMEA3472056_00397 | Not Available | Positive | 411441 - 413288 | 67844.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





