Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | SAMEA3472056_00308 | Not Available | Positive | 320100 - 322376 | 84211.9 |
| Trna-ser | Not Available | Not Available | Positive | 322781 - 322868 | Not Available |
| translation initiation factor if-1 | SAMEA3472056_00312 | Not Available | Negative | 323122 - 323340 | 8250.1 |
| leucyl/phenylalanyl-trna-protein transferase | SAMEA3472056_00313 | Not Available | Negative | 323625 - 324329 | 26620.0 |
| abc transporter atp-binding protein/permease | SAMEA3472056_00314 | Not Available | Negative | 324371 - 326092 | 62939.2 |
| abc transporter atp-binding protein/permease | SAMEA3472056_00315 | Not Available | Negative | 326093 - 327859 | 65074.0 |
| thioredoxin reductase | SAMEA3472056_00316 | Not Available | Negative | 327982 - 328947 | 34625.1 |
| leucine-responsive transcriptional regulator | SAMEA3472056_00317 | Not Available | Positive | 329492 - 329986 | 18887.9 |
| dna translocase ftsk | SAMEA3472056_00318 | Not Available | Positive | 330121 - 334227 | 151020.0 |
| outer-membrane lipoprotein carrier protein | SAMEA3472056_00319 | Not Available | Positive | 334386 - 334997 | 22498.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





