Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp oxidoreductase, nadh-dependent | SAMEA3472056_00298 | Not Available | Negative | 308055 - 309023 | 35886.0 |
| hydroxylamine reductase | SAMEA3472056_00299 | Not Available | Negative | 309035 - 310687 | 60109.3 |
| transporter | SAMEA3472056_00300 | Not Available | Negative | 310831 - 311730 | 32360.2 |
| aquaporin z | SAMEA3472056_00301 | Not Available | Negative | 312188 - 312883 | 23703.2 |
| nucleoside triphosphate hydrolase domain | SAMEA3472056_00302 | Not Available | Positive | 313309 - 314967 | 63560.9 |
| virulence protein | SAMEA3472056_00303 | Not Available | Negative | 314964 - 315956 | 38265.6 |
| macrolide-specific efflux protein | SAMEA3472056_00304 | Not Available | Positive | 316071 - 317186 | 40656.4 |
| macrolide export atp-binding/permease protein | SAMEA3472056_00305 | Not Available | Positive | 317183 - 319129 | 70690.8 |
| stationary phase/starvation inducible regulatory protein cspd | SAMEA3472056_00306 | Not Available | Negative | 319202 - 319426 | 7969.41 |
| atp-dependent clp protease adaptor protein | SAMEA3472056_00307 | Not Available | Positive | 319749 - 320069 | 12179.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





