Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine abc transporter, substrate-binding protein | SAMEA3472056_00288 | Not Available | Negative | 296631 - 297362 | 26961.0 |
| arginine transport system atp-binding protein | SAMEA3472056_00289 | Not Available | Negative | 297380 - 298108 | 27023.7 |
| lipoprotein | SAMEA3472056_00290 | Not Available | Negative | 298326 - 298841 | 18907.2 |
| putative type iii effector protein (pentapeptide repeat protein) | SAMEA3472056_00291 | Not Available | Positive | 299456 - 301255 | 69406.6 |
| conserved protein, upf0145 family | SAMEA3472056_00292 | Not Available | Positive | 301466 - 301789 | 11437.7 |
| putative n-acetylmuramoyl-l-alanine amidase | SAMEA3472056_00293 | Not Available | Positive | 301786 - 302616 | 31098.2 |
| nucleotide di-p-sugar epimerase or dehydratase | SAMEA3472056_00294 | Not Available | Negative | 302613 - 303626 | 38087.9 |
| nad(p)-binding rossmann-fold domain | SAMEA3472056_00295 | Not Available | Negative | 303725 - 305155 | 53861.3 |
| low specificity l-threonine aldolase | SAMEA3472056_00296 | Not Available | Negative | 305166 - 306167 | 36482.8 |
| pyruvate oxidase | SAMEA3472056_00297 | Not Available | Negative | 306204 - 307922 | 62012.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





