Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator (manganese transport regulator) | SAMEA3472056_00237 | Not Available | Positive | 243479 - 243946 | 17641.3 |
| transporter | SAMEA3472056_00238 | Not Available | Positive | 243943 - 245061 | 41209.3 |
| l,d-transpeptidase | SAMEA3472056_00239 | Not Available | Negative | 245119 - 246039 | 33327.2 |
| putative abc transporter atp-binding protein | SAMEA3472056_00240 | Not Available | Positive | 246258 - 247850 | 59861.4 |
| protein | SAMEA3472056_00241 | Not Available | Negative | 248091 - 249356 | 47331.9 |
| putative hydrolase | SAMEA3472056_00242 | Not Available | Negative | 249508 - 250323 | 30429.5 |
| putative formate acetyltransferase 3 (pyruvate formate lyase 3) | SAMEA3472056_00243 | Not Available | Negative | 250469 - 252901 | 90126.5 |
| putative pyruvate formate-lyase 3-activating enzyme | SAMEA3472056_00244 | Not Available | Negative | 252907 - 253806 | 33138.0 |
| fructose-6-phosphate aldolase | SAMEA3472056_00245 | Not Available | Positive | 253937 - 254599 | 23112.3 |
| molybdopterin biosynthesis protein | SAMEA3472056_00246 | Not Available | Negative | 254675 - 255424 | 26699.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





