Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472056_00217 | Not Available | Negative | 220163 - 220765 | 23701.5 |
| putative toxin | SAMEA3472056_00218 | Not Available | Positive | 221070 - 223082 | 76793.2 |
| atp-dependent dna helicase ding | SAMEA3472056_00219 | Not Available | Positive | 223366 - 225516 | 81493.0 |
| putative glycosyl transferase | SAMEA3472056_00220 | Not Available | Positive | 225544 - 226506 | 35012.6 |
| putative dehydrogenase | SAMEA3472056_00221 | Not Available | Positive | 226647 - 227732 | 38886.3 |
| protein | SAMEA3472056_00222 | Not Available | Negative | 227961 - 228221 | 8568.2 |
| putative zinc ion binding protein | SAMEA3472056_00223 | Not Available | Negative | 228487 - 228753 | 9804.42 |
| hydroxylase | SAMEA3472056_00224 | Not Available | Negative | 228827 - 229501 | 25368.1 |
| catecholate siderophore tonb-dependent receptor | SAMEA3472056_00225 | Not Available | Negative | 229546 - 231828 | 81932.4 |
| protein involved in colanic acid production | SAMEA3472056_00226 | Not Available | Negative | 232093 - 232353 | 8896.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





