Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472056_00148 | Not Available | Negative | 156446 - 156868 | 15666.5 |
| uncharacterised protein | SAMEA3472056_00149 | Not Available | Negative | 156949 - 157893 | 36318.2 |
| cytochrome d ubiquinol oxidase subunit 1 | SAMEA3472056_00150 | Not Available | Positive | 158699 - 160267 | 58208.4 |
| cytochrome d ubiquinol oxidase subunit 2 | SAMEA3472056_00151 | Not Available | Positive | 160283 - 161422 | 42455.6 |
| cyd operon protein ybgt | SAMEA3472056_00152 | Not Available | Positive | 161437 - 161550 | 4041.9 |
| inner membrane protein | SAMEA3472056_00153 | Not Available | Positive | 161550 - 161843 | 10912.0 |
| acyl-coa thioester hydrolase | SAMEA3472056_00154 | Not Available | Positive | 161993 - 162397 | 15562.9 |
| colicin import protein | SAMEA3472056_00155 | Not Available | Positive | 162394 - 163086 | 25599.2 |
| colicin import protein | SAMEA3472056_00156 | Not Available | Positive | 163090 - 163518 | 15383.9 |
| cell envelope integrity inner membrane protein tola | SAMEA3472056_00157 | Not Available | Positive | 163583 - 164881 | 44199.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





