Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase-oxidase | SAMEA3472056_00118 | Not Available | Positive | 122209 - 122952 | 26894.0 |
| putative allophanate hydrolase subunit 1 | SAMEA3472056_00119 | Not Available | Positive | 122975 - 123631 | 23948.0 |
| putative allophanate hydrolase subunit 2 | SAMEA3472056_00120 | Not Available | Positive | 123625 - 124557 | 34458.6 |
| lamb/ycsf-family protein | SAMEA3472056_00121 | Not Available | Positive | 124547 - 125281 | 25862.9 |
| endonuclease viii (dna glycosylase/ap lyase nei) | SAMEA3472056_00122 | Not Available | Positive | 125317 - 126108 | 29842.8 |
| transport protein abrb | SAMEA3472056_00123 | Not Available | Negative | 126105 - 127151 | 36932.2 |
| fimbrial-like adhesin protein | SAMEA3472056_00124 | Not Available | Negative | 127300 - 128361 | 39664.9 |
| periplasmic pilus chaperone family protein | SAMEA3472056_00125 | Not Available | Negative | 128358 - 129089 | 27502.2 |
| fimbrial usher protein | SAMEA3472056_00126 | Not Available | Negative | 129104 - 131554 | 90101.3 |
| fimbrial-like protein | SAMEA3472056_00127 | Not Available | Negative | 131613 - 132179 | 19974.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





