Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf2618) | SAMEA3472056_00108 | Not Available | Negative | 109619 - 109723 | 4288.17 |
| two-component response regulator | SAMEA3472056_00109 | Not Available | Negative | 109998 - 110675 | 25280.5 |
| two-component sensor kinase | SAMEA3472056_00110 | Not Available | Negative | 110672 - 113356 | 98697.1 |
| potassium-transporting atpase subunit c | SAMEA3472056_00111 | Not Available | Negative | 113349 - 113921 | 20288.3 |
| potassium-transporting atpase b chain | SAMEA3472056_00112 | Not Available | Negative | 113930 - 115978 | 72222.5 |
| potassium-transporting atpase subunit a | SAMEA3472056_00113 | Not Available | Negative | 116001 - 117674 | 59135.7 |
| protein | SAMEA3472056_00114 | Not Available | Positive | 118076 - 118282 | 8275.0 |
| photoreactivation-associated protein | SAMEA3472056_00115 | Not Available | Positive | 118383 - 118892 | 20314.5 |
| deoxyribodipyrimidine photolyase, fad-binding | SAMEA3472056_00116 | Not Available | Positive | 118889 - 120307 | 53593.8 |
| putative oligopeptide transporter | SAMEA3472056_00117 | Not Available | Negative | 120457 - 121938 | 54081.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





