Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3472056_00067 | Not Available | Positive | 68407 - 69114 | 27745.5 |
| dnaj-class chaperone | SAMEA3472056_00068 | Not Available | Positive | 69111 - 70538 | 55225.3 |
| outer membrane protein | SAMEA3472056_00069 | Not Available | Negative | 70548 - 71102 | 20900.9 |
| putative trna ligase | SAMEA3472056_00070 | Not Available | Positive | 71204 - 71911 | 26971.8 |
| hsc56 co-chaperone of hscc | SAMEA3472056_00071 | Not Available | Positive | 71908 - 73359 | 55398.6 |
| chaperone protein | SAMEA3472056_00072 | Not Available | Negative | 73419 - 75089 | 61965.7 |
| pyrimidine-specific ribonucleoside hydrolase (cytidine/uridine-specific hydrolase) | SAMEA3472056_00073 | Not Available | Negative | 75173 - 76108 | 33808.9 |
| glutamate/aspartate abc transporter atp-binding protein | SAMEA3472056_00074 | Not Available | Negative | 76226 - 76951 | 26662.7 |
| glutamate/aspartate abc transporter, permease protein | SAMEA3472056_00075 | Not Available | Negative | 76951 - 77625 | 24916.2 |
| glutamate/aspartate transport system permease | SAMEA3472056_00076 | Not Available | Negative | 77625 - 78365 | 27504.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





