Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | SAMEA3472056_00057 | Not Available | Negative | 58011 - 59912 | 70860.6 |
| putative cytoplasmic protein ybea | SAMEA3472056_00058 | Not Available | Negative | 59943 - 60410 | 17342.1 |
| putative acr | SAMEA3472056_00059 | Not Available | Negative | 60414 - 60731 | 11582.9 |
| alpha-ribazole-5'-phosphate phosphatase | SAMEA3472056_00060 | Not Available | Negative | 60991 - 61602 | 23386.8 |
| nicotinic acid mononucleotide adenylyltransferase | SAMEA3472056_00061 | Not Available | Negative | 61626 - 62267 | 24515.3 |
| dna polymerase iii subunit delta | SAMEA3472056_00062 | Not Available | Negative | 62269 - 63300 | 38702.0 |
| rare lipoprotein b | SAMEA3472056_00063 | Not Available | Negative | 63300 - 63881 | 21357.8 |
| leucyl-trna synthetase | SAMEA3472056_00064 | Not Available | Negative | 63896 - 66478 | 97240.0 |
| putative alpha helical protein | SAMEA3472056_00065 | Not Available | Positive | 66714 - 67196 | 18798.2 |
| sel1 domain-containing protein | SAMEA3472056_00066 | Not Available | Negative | 67266 - 68243 | 37075.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





