Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr-type | SAMEA3472056_00025 | Not Available | Negative | 28522 - 29424 | 34406.9 |
| disulfide isomerase/thiol-disulfide oxidase | SAMEA3472056_00026 | Not Available | Negative | 29633 - 30379 | 27496.5 |
| alkyl hydroperoxide reductase subunit c | SAMEA3472056_00027 | Not Available | Positive | 30751 - 31314 | 20762.5 |
| alkyl hydroperoxide reductase | SAMEA3472056_00028 | Not Available | Positive | 31413 - 33008 | 57376.9 |
| universal stress protein uspg | SAMEA3472056_00029 | Not Available | Negative | 33129 - 33557 | 15937.1 |
| oxidoreductase, zn-dependent and nad(p)-binding | SAMEA3472056_00030 | Not Available | Positive | 33778 - 35016 | 44239.2 |
| uncharacterised protein | SAMEA3472056_00031 | Not Available | Positive | 35097 - 35366 | 9994.08 |
| regulator of nucleoside diphosphate kinase | SAMEA3472056_00032 | Not Available | Negative | 35247 - 35657 | 14928.0 |
| ribonuclease i | SAMEA3472056_00034 | Not Available | Negative | 35887 - 36693 | 29623.1 |
| citrate carrier | SAMEA3472056_00035 | Not Available | Negative | 36807 - 38270 | 53095.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





