Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 transposase | SAMEA3472056_05603 | Not Available | Positive | 5660429 - 5660704 | 9868.96 |
| is1 transposase | SAMEA3472056_05604 | Not Available | Positive | 5660749 - 5661126 | 14931.2 |
| transposase | SAMEA3472056_05613 | Not Available | Positive | 5664179 - 5664826 | 24020.4 |
| transposase | SAMEA3472056_05614 | Not Available | Positive | 5664826 - 5665173 | 13055.0 |
| is66 family transposase orfb | SAMEA3472056_05615 | Not Available | Positive | 5665193 - 5666764 | 58705.1 |
| cp4-57 prophage protein | SAMEA3472056_05616 | Not Available | Positive | 5666892 - 5667263 | 14234.2 |
| uncharacterised protein | SAMEA3472056_05617 | Not Available | Negative | 5667585 - 5668187 | 23690.5 |
| regulatory protein | SAMEA3472056_05618 | Not Available | Negative | 5668282 - 5668488 | 7761.52 |
| lipoprotein | SAMEA3472056_05619 | Not Available | Positive | 5669719 - 5670450 | 26387.8 |
| agmatinase | SAMEA3472056_05620 | Not Available | Positive | 5670586 - 5671506 | 33558.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





