Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 5650517 - 5650591 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 5650708 - 5650792 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 5650801 - 5650876 | Not Available |
| pantothenate kinase | SAMEA3472056_05595 | Not Available | Positive | 5651262 - 5652188 | 35430.6 |
| bifunctional protein | SAMEA3472056_05596 | Not Available | Negative | 5652217 - 5653182 | 35301.1 |
| udp-n-acetylenolpyruvoylglucosamine reductase | SAMEA3472056_05597 | Not Available | Negative | 5653179 - 5654207 | 37875.2 |
| uncharacterised protein | SAMEA3472056_05599 | Not Available | Negative | 5654973 - 5657522 | 98001.3 |
| type iii secretion system protein | SAMEA3472056_05600 | Not Available | Negative | 5657949 - 5658368 | 15293.7 |
| type iii secretion system protein | SAMEA3472056_05601 | Not Available | Negative | 5658361 - 5659506 | 43548.6 |
| type iii secretion system protein | SAMEA3472056_05602 | Not Available | Negative | 5659511 - 5660224 | 26280.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





