Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber domain-containing protein | SAMEA3472056_05582 | Not Available | Negative | 5643681 - 5644412 | 23155.0 |
| putative ethidium bromide resistance protein | SAMEA3472056_05583 | Not Available | Positive | 5644861 - 5645193 | 11573.6 |
| transposase | SAMEA3472056_05584 | Not Available | Negative | 5645440 - 5646015 | 21450.8 |
| dihydropteroate synthase | SAMEA3472056_05585 | Not Available | Negative | 5646373 - 5647164 | 28900.0 |
| uncharacterised protein | SAMEA3472056_05586 | Not Available | Negative | 5647255 - 5647503 | 9538.65 |
| dephospho-coa kinase/protein folding accessory domain-containing protein | SAMEA3472056_05587 | Not Available | Negative | 5647633 - 5647878 | 9317.42 |
| clavaldehyde dehydrogenase | SAMEA3472056_05588 | Not Available | Negative | 5647916 - 5648779 | 31479.7 |
| uncharacterised protein | SAMEA3472056_05589 | Not Available | Negative | 5648792 - 5648908 | 4083.21 |
| h+ antiporter protein | SAMEA3472056_05590 | Not Available | Negative | 5648925 - 5649554 | 22826.2 |
| Trna-thr | Not Available | Not Available | Positive | 5650435 - 5650510 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





