Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside resistance protein aada | SAMEA3472056_05572 | Not Available | Negative | 5634968 - 5635747 | 29124.9 |
| had family hydrolase | SAMEA3472056_05573 | Not Available | Negative | 5635817 - 5636425 | 22607.3 |
| streptothricin acetyltransferase sat-1 | SAMEA3472056_05574 | Not Available | Negative | 5636521 - 5637447 | 34202.6 |
| class 1 integron integrase protein inti1 | SAMEA3472056_05575 | Not Available | Positive | 5637530 - 5638543 | 38383.4 |
| phage p2-related tail formation protein | SAMEA3472056_05576 | Not Available | Positive | 5639157 - 5639768 | 22567.9 |
| phage tail collar protein | SAMEA3472056_05577 | Not Available | Positive | 5639765 - 5641138 | 48640.3 |
| resolvase domain-containing protein | SAMEA3472056_05578 | Not Available | Negative | 5641722 - 5642315 | 22159.0 |
| tail fiber domain-containing protein | SAMEA3472056_05579 | Not Available | Positive | 5642346 - 5643002 | 21541.6 |
| uncharacterised protein | SAMEA3472056_05580 | Not Available | Positive | 5643186 - 5643446 | 9579.42 |
| putative phage tail fiber assembly protein | SAMEA3472056_05581 | Not Available | Negative | 5643415 - 5643681 | 9670.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





