Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cp4-44 prophage | SAMEA3472056_05552 | Not Available | Positive | 5613371 - 5616490 | 106521.0 |
| membrane protein, yeer | SAMEA3472056_05553 | Not Available | Positive | 5616611 - 5619127 | 91477.8 |
| uncharacterised protein | SAMEA3472056_05554 | Not Available | Positive | 5619203 - 5619658 | 16902.1 |
| putative plasmid-like protein | SAMEA3472056_05555 | Not Available | Positive | 5619737 - 5619970 | 8777.4 |
| uncharacterised protein | SAMEA3472056_05556 | Not Available | Negative | 5620076 - 5620387 | 11628.0 |
| lysr family transcriptional regulator | SAMEA3472056_05557 | Not Available | Negative | 5620939 - 5621064 | 4546.61 |
| uncharacterised protein | SAMEA3472056_05558 | Not Available | Negative | 5621139 - 5621243 | 4021.1 |
| putative glutamate permease | SAMEA3472056_05559 | Not Available | Negative | 5621295 - 5622500 | 42719.9 |
| monooxygenase | SAMEA3472056_05560 | Not Available | Positive | 5622944 - 5623264 | 12500.9 |
| regulatory protein in the aminoacid metabolism | SAMEA3472056_05561 | Not Available | Positive | 5623257 - 5623643 | 13818.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





