Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna methylase | SAMEA3472056_05541 | Not Available | Negative | 5603394 - 5604077 | 25462.5 |
| protein stbb | SAMEA3472056_05542 | Not Available | Negative | 5604469 - 5604891 | 15805.9 |
| plasmid segregation protein parm | SAMEA3472056_05543 | Not Available | Negative | 5604894 - 5605874 | 36000.9 |
| uncharacterised protein | SAMEA3472056_05544 | Not Available | Positive | 5606213 - 5606557 | 12962.5 |
| uncharacterised protein | SAMEA3472056_05545 | Not Available | Negative | 5606677 - 5606772 | 3432.54 |
| uncharacterised protein | SAMEA3472056_05546 | Not Available | Negative | 5606974 - 5608041 | 39776.4 |
| uncharacterised protein | SAMEA3472056_05547 | Not Available | Positive | 5608164 - 5608724 | 21477.9 |
| ion channel | SAMEA3472056_05548 | Not Available | Positive | 5608846 - 5609469 | 23298.1 |
| uncharacterised protein | SAMEA3472056_05549 | Not Available | Negative | 5609771 - 5610739 | 38255.5 |
| putative gtp-binding protein | SAMEA3472056_05550 | Not Available | Positive | 5612127 - 5612999 | 32480.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





