Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0406 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1414317 bp
Thymine Count
1409913 bp
Guanine Count
1434864 bp
Cytosine Count
1433688 bp
Genome Length
5693058 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
531 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative gtpase | SAMEA3472056_05520 | Not Available | Positive | 5580928 - 5581164 | 8480.38 |
| putative gtp-binding protein | SAMEA3472056_05521 | Not Available | Positive | 5581182 - 5581799 | 23432.0 |
| putative vimentin | SAMEA3472056_05522 | Not Available | Positive | 5582017 - 5584413 | 90187.0 |
| methyl-accepting chemotaxis protein | SAMEA3472056_05523 | Not Available | Positive | 5584410 - 5585315 | 33853.8 |
| phospholipase | SAMEA3472056_05524 | Not Available | Positive | 5585312 - 5586382 | 38239.3 |
| uncharacterised protein | SAMEA3472056_05525 | Not Available | Positive | 5586518 - 5587201 | 25170.2 |
| uncharacterised protein | SAMEA3472056_05526 | Not Available | Positive | 5587217 - 5587627 | 15097.3 |
| uncharacterised protein | SAMEA3472056_05527 | Not Available | Negative | 5587854 - 5588168 | 11531.0 |
| rsha repeat element core protein | SAMEA3472056_05528 | Not Available | Negative | 5588593 - 5592456 | 145931.0 |
| putative glutathione s-transferase | SAMEA3472056_05529 | Not Available | Positive | 5592685 - 5593293 | 22546.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





